Popular GitHub Repositories for Cell Cycle

scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics

StarDist - Object Detection with Star-convex Shapes

Companion repository to GANs in Action: Deep learning with Generative Adversarial Networks

一种基于迭代多大型语言模型的共识框架，用于提高单细胞RNA测序数据中细胞类型注释的准确性

Deep Learning Library for Single Cell Analysis

PyAF is an Open Source Python library for Automatic Time Series Forecasting built on top of popular pydata modules.

DANCE: a deep learning library and benchmark platform for single-cell analysis

? immunarch [R package] – Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

Scientific Large Language Models: A Survey on Biological & Chemical Domains

Single cell perturbation prediction

CellViT: Vision Transformers for Precise Cell Segmentation and Classification

Topological Deep Learning

A deep learning model to age faces in the wild, currently runs at 60+ fps on GPUs

Nested LSTM Cell

A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.

Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

Pytorch pipeline for 3D image domain translation using Cycle-Generative-Adversarial-networks, without paired examples.

[CVPR 2018 NTIRE Workshop] Cycle-Dehaze: Enhanced CycleGAN for Single Image Dehazing