Popular GitHub Repositories for Chromatin

C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.

? Normalize and parse domain names from messy input, cleaning errors and preserving structure for easier use and analysis.

qPCR Plate Designer is a browser based tool to streamline the design, execution, and analysis of qPCR experiments. It is particularly suited for chromatin profiling workflows such as CUT&RUN, CUT&Tag, and ChIP-qPCR, where comparative epigenetic mark enrichment is quantified using the ΔΔCt method

Use Active Learning to diversely sample the dataset and generate new labels to train a classifier to predict whether the microscopy image contains a linear arrangement of 53BP1 accumulation on chromatin surrounding DNA damage, or irradiation induced foci.