Popular GitHub Repositories for Ontologies

Open Source research tool to search, browse, analyze and explore large document collections by Semantic Search Engine and Open Source Text Mining & Text Analytics platform (Integrates ETL for document processing, OCR for images & PDF, named entity recognition for persons, organizations & locations, metadata management by thesaurus & ontologies, search user interface & search apps for fulltext search, faceted search & knowledge graph)

A package for ontology engineering with deep learning and language models.

PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models

LLM-driven curation assist tool

An organizational AI system to build a suite of AI assistants leveraging ontologies as a unifying field that connect data, AI models, workflows, analytics, and external systems. Star and follow to stay updated [Beta]

LLMs4OM: Matching Ontologies with Large Language Models

A basic implementation of ontologies and knowledge graphs.

Rare disease identification from free-text clinical notes with ontologies and weak supervision

An interpretable machine learning pipeline over knowledge graphs

An LLM-based system for collaborative ontology engineering

BioGITOM: Matching Biomedical Ontologies with Graph Isomorphism Transformer

MIRA: machine-assisted modeling of dynamical systems

Learning Ontologies Via Embeddings

Biomedical Relation Extraction with Knowledge Graph-based Recommendations

Transforming OWL for statistical learning

Root Cause Analysis in the Industrial Domain using Knowledge Graphs: A Case Study on Power Transformers

Intelligent help system for Discrete Math

DEMO example knowledge base created using DRAGON-AI

Convert domain knowledge from Natural Language to a Knowledge Base

OntoSample is a python package that offers classic sampling techniques for OWL ontologies/knowledge bases. Furthermore, we have tailored the classic sampling techniques to the setting of concept learning making use of learning problem.