Popular GitHub Repositories for Pubmed Central

Nerdlog: fast, remote-first, multi-host TUI log viewer with timeline histogram and no central server

Central place for the engineering/scaling WG: documentation, SLURM scripts and logs, compute environment and data.

A central, open resource for data and tools related to chain-of-thought reasoning in large language models. Developed @ Samwald research group: https://samwald.info/

SEED RL: Scalable and Efficient Deep-RL with Accelerated Central Inference. Implements IMPALA and R2D2 algorithms in TF2 with SEED's architecture.

【ICLR 2024?】 Extending Video-Language Pretraining to N-modality by Language-based Semantic Alignment

A Model Context Protocol (MCP) Gateway. Serves as a central management point for tools, resources, and prompts that can be accessed by MCP-compatible LLM applications. Converts REST API endpoints to MCP, composes virtual MCP servers with added security and observability, and converts between protocols (stdio, SSE).

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).

NyaProxy acts like a smart, central manager for accessing various online services (APIs) – think AI tools (like OpenAI, Gemini, Anthropic), image generators, or almost any web service that uses access keys. It helps you use these services more reliably, efficiently, and securely.

A joint community effort to create one central leaderboard for LLMs.

An agentic AI application that allows you to chat with your papers and gather also information from papers on ArXiv and on PubMed

Build, test and manage your AI Agents in the central place.

NLP framework in python for entity recognition and relationship extraction

P2PFL is a decentralized federated learning library that enables federated learning on peer-to-peer networks using gossip protocols, making collaborative AI model training possible without reliance on central servers.

SciFive: a text-text transformer model for biomedical literature

生物医学模型上下文协议

VerifAI initiative to build open-source easy-to-deploy generative question-answering engine that can reference and verify answers for correctness (using posteriori model)

MCP server for searching and querying PubMed medical papers/research database

Central Moment Discrepancy for Domain-Invariant Representation Learning (ICLR 2017, keras)

? A central GitHub repository for sharing Core ML models